SE3520418

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6636
  • Mimulus guttatus
  • SE3520418
  • Mutator
  • M43
  • scaffold_4:18390920-18391110
  • TTCTAGAAC
  • TTCTAGAACGGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
         C     GTTT           C                                  ---CT    ACAATCACACACACACACCCATGT
 TTCTAGAA GGTTT    GATGCTACACC GGTGAAATACACCGGGTGATTATTAACCGTTGAT     GCAC                        
 |||||||| |||||    ||||||||||| ||||||||||||||||||||||||||||||||||     ||||                         
 AAGATCTT CCAGA    CTACGATGTGG CCACTTTATGTGGCCCATTAATAATTGGCAACTA     CTTT                        
C        -     AACT           A                                  CACCA    ATTGAAGGATGATTCGTGTGTATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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