SE3520437

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6655
  • Mimulus guttatus
  • SE3520437
  • Mutator
  • M45
  • scaffold_12:1055917-1056076
  • TAAGTATTA
  • AGTATTACGGGCAAATTACGGCCACCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      AC                 C  GCTG  C      C            -C       CCTATT   --      A
  AGTATT  GGGCAAATTACGGCCAC CC    AG TATGGT AAATTACGAAAA  CCCCTCT      TGG  GTAATT 
  ||||||  ||||||||||||||||| ||    || |||||| ||||||||||||  |||||||      |||  |||||| G
  TTATGA  CCCGTTTAATGCCGGTG GG    TC ATACCG TTTAATGCTTTT  GGGGAGA      ACC  CATTAA 
CA      AT                 A  --AG  C      T            TT       --ACAC   TA      T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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