SE3520459

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6677
  • Mimulus guttatus
  • SE3520459
  • Mutator
  • M14
  • scaffold_2:14493500-14493750
  • TAATTTAAA
  • AGGGTAAATAACAACCACCTCACTGAAGTAAAGTGTAATTACGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTTAA    T    A  ---    -A     CTG   TA  G   AA        AAAA            GAGA   C       G A  C           A           ---C     CCCTA
        AGGG AAAT AC   AACC  CCTCA   AAG  AA TGT  TTACGAAA    TCCCTTATTTTT    AAT ACATCCA C CC TGTAGTTTGTA ATTTCTTACAT    CACCC     
        |||| |||| ||   ||||  |||||   |||  || |||  ||||||||    ||||||||||||    ||| ||||||| | || ||||||||||| |||||||||||    |||||      
        TCCC TTTA TG   TTGG  GGAGT   TTC  TT ATA  AATGCTTT    GGGGAGTAAAAA    TTA TGTAGGT G GG GCGTTAAACAT TAAAGAATGTG    GTGGG     
AAATTTAA    T    A  CTA    GG     CCA   --  G   --        --GG            GGTA   A       G A  A           C           AATT     AAAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3