SE3510484

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6702
  • Mimulus guttatus
  • SE3510484
  • Tc1/Mariner
  • St3
  • scaffold_12:20532831-20533097
  • TA
  • TACTCCCTCTGTTCCATAATATCTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
              CAT    TC    -TC      GAATTTTTTTTGTTCCATATTATCTGTCACTTTACAATTTCAATGTTGCATTAATTGCTTATTTTTCAATTTTACCCTTATTAACTCTATAACACTCT
TACTCCCTCTGTTC   AATA  TGTC   TTTTAA                                                                                                  
||||||||||||||   ||||  ||||   ||||||                                                                                                   
ATGAGGGAGGCAAG   TTAT  ACAG   AAAGTG                                                                                                  
              AAT    CC    CAA      GAACCGTCTTTAGAATTCTTAGAGTTATTTATACAGAACTAAAATCCTTTTATCTATAACTACCTGGTTTTATGGGAACAAATAATTCATTACGTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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