SE3520518

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6736
  • Mimulus guttatus
  • SE3520518
  • Mutator
  • M16
  • scaffold_13:4154096-4154307
  • CTACTTCAC
  • GGTTCCTTCGACCCTACACCCGGTGATAAACACTGGGTGAGTCTTCTGCTGCCACGTGTCCCTTTTTTTTATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTACTTCACC    CC                                 A                   CC       T      ----TCTAAA    -   AA  TA
          GGTT  TTCGACCCTACACCCGGTGATAAACACTGGGTG GTCTTCTGCTGCCACGTGT  CTTTTTT TATTTT          ACCC CTA  GG  
          ||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||          |||| |||  ||   
          CTAA  AAGCTGGGATGTGGGCCACTATTTGTGGCCCAC CAGAAGACGACGGTGCACA  GAAAAAA ATAAAA          TGGG GAT  CC  
CCACTTCATC    AC                                 C                   TA       C      TATTATATAA    C   -C  AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3