SE3530540

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6758
  • Mimulus guttatus
  • SE3530540
  • hAT
  • Hat2
  • scaffold_12:5753149-5753384
  • ATAACAAT
  • ATCAGGGGCGTACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAACA          T    ----------------------------------AC   TAAGGCTGGGGTGGCCCCCGCCCCCCCAAGATTTTTTTTAAGCTGTTTTTTTTTTTTTAGGTATTTATGTATTAG
      ATCAGGGGCG ACCC                                    GCC                                                                           
      |||||||||| ||||                                    |||                                                                            
      TAGTCCCCGC TGGG                                    AAA                                                                           
TAACAA          C    CCCCCCCAAAAGAACCCCCGCCTTTATATACCCATT   TTCTCTCTTAAAAAAAAACAAAAATCCCTGATTTCACATCTTTTAATTTTCAAACTCCCCCGCTTTCACATATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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