SE3510541

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6759
  • Mimulus guttatus
  • SE3510541
  • Tc1/Mariner
  • St1
  • scaffold_3:3463182-3463447
  • TA
  • TACTCCCTCTTTCCTATTTTATTTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TTTCTA    -  TTTTTTTATTTCAAAATAATTGTCACTTTACAATTTCAATGGCACATTTATTGTGTTTTCTCAAATTTACCCTTACTACTATTAAAAGAATTAA
TACTCCCTCTTTCCTATTTTATTTGTC      GAGA TA                                                                                              
|||||||||||||||||||||||||||      |||| ||                                                                                               
ATGAGGGAGGAAGGGTAAAATAAACAG      CTCG GT                                                                                              
                           -CAAAA    A  ACGTGTGTATAATTCTTTCAGTTATTTACACGTACCTAAGATGTTTTTAGTATTATTTTGCTGATTTTTTAGTGAGAATAAATAACGAGGTAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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