SE3520555

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6773
  • Mimulus guttatus
  • SE3520555
  • Mutator
  • M24
  • scaffold_17:1035045-1035347
  • TAGTTTTAT
  • GGGTAAATAGCACTTACCCCCTGTGATTTGAACTCTGTGCACATGACCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAGTTTTAT               --          A     A  C               ATTATACTTTCAATATA   TCTGGCCCCCTTGTATTTTAATATAAGCACATAACCCCCTTGTGCTTTAAAAAATTTCATGTTCCTAATGAGCATGAT
         GGGTAAATAGCACTT  ACCCCCTGTG TTTGA CT TGTGCACATGACCCC                 GCA                                                                              
         |||||||||||||||  |||||||||| ||||| || |||||||||||||||                 |||                                                                               
         CCCATTTATCGTGAA  TGGGGGACAC AAACT GA ACACGTGTACTGGGG                 TCA                                                                              
TATTTTGAT               AT          C     C  A               -------------GACA   AACTTGAAACACGTGTACTGGGGGGAACATGAAAATGATATTCATCTATTAGGGGACACCATAAGGTGAACCACTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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