SE3550564

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6782
  • Mimulus guttatus
  • SE3550564
  • PIF/harbinger
  • To2
  • scaffold_7:12845923-12846164
  • TTA
  • AGGCCCCGTTTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT              - -   AAGATAAGATTAGCCAAGATAGGATTAAATAGTCTAATGAAACCCAATTATTTTATTGGAGCTCGCGACGTCCAACAAAAAAAACACACTAGAAGGCAAG
  AGGCCCCGTTTGGT T GGC                                                                                                    
  |||||||||||||| | |||                                                                                                     
  TCCGGGGCAAACCA C GTT                                                                                                    
AT              A G   CAATTCGGTACTAATTGATTTATCAACCTGAATTAAACTACAAACCATAGGGGTTATTTAACGGCCCAGCTGGGCGGTTTTAATACATTAGTACCGAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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