SE3550582

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6800
  • Mimulus guttatus
  • SE3550582
  • PIF/harbinger
  • To2
  • scaffold_8:20442303-20442523
  • TTA
  • AGGCCTCGTTTGGTTGCCAAGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                CCA    A     AAATAATCTACTGGAAACCCAATTATTTTATTGGACGTCCAACAAAAAATTCCCTCTAAAAAGGCAAGATAACCCATGA
  AGGCCTCGTTTGGTTG   AGAT AGATT                                                                               
  ||||||||||||||||   |||| |||||                                                                               T
  TCCGGAGCAAACCAAC   TCTA TTGGT                                                                               
AT                CCC    A     AATAATTGATTTATTAACCTGAAACAAACTACAAACCATAGGGGTTACTGAATAGACCAGCTGGGCGTTTATAATACAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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