SE3510605

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6823
  • Mimulus guttatus
  • SE3510605
  • Tc1/Mariner
  • St2
  • scaffold_8:3458560-3458828
  • TA
  • TACTCCCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
         -C    CAATTTAAATGTCGTTTTGGATTGTTTTGCACATATTAAGAAAATCAATAAATGTGCATAAATTATAGTAAAAAAAACATATAAAATTACAAAAATATCCTTGACATTAATTGATTCTCA
TACTCCCTC  GTCC                                                                                                                        
|||||||||  ||||                                                                                                                         
ATGAGGGAG  AGGG                                                                                                                        
         AC    TATAATATACAGAAAGATCCCTCAAAAAAAACAGGGTTTAATAAACAGTAAAATCTAAAAGTTACTTCGTAATTAACGTAATAAAAGTTAAAATGGGAATTAGTGAGGATTAATTAATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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