SE3550642

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6860
  • Mimulus guttatus
  • SE3550642
  • PIF/harbinger
  • To8
  • scaffold_4:9436811-9437045
  • TTA
  • GAGGGTGTTTGGCTAGACT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTA      --             -------       TTTTTTTTTCTTTTAAAAGTACCGCTAACCCACCTGTTTATTTAAGATCTTATAATGAGTAAAAATAGCTTATAAGCTCATCACC
   GAGGGT  GTTTGGCTAGACT       TAGAAGA                                                                                     
   ||||||  |||||||||||||       |||||||                                                                                      
   TTCCCG  CAAACCGATTTGA       TTTATTG                                                                                     
  A      TA             AACAAAA       TATATTCGAGAATGCAAACTATTCTACAAAATTCTCGACTATTCAACAATGCAGAATAAAAACGTTAATTACTAATTTCACAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3