SE3520647

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6865
  • Mimulus guttatus
  • SE3520647
  • Mutator
  • M10
  • scaffold_7:3437890-3438088
  • AAACTGATG
  • GGGGAATACGATGCTACACCCGGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAACTGATG       A G          C     TTTTC            TTTTCTT ACATGTGTCCTTTTTTATTTATTTTATAATTATATTTCTAAAA
         GGGGAAT C ATGCTACACC GGTGA     ACCGGGTGGCTC       G                                           
         ||||||| | |||||||||| |||||     ||||||||||||       |                                            
         CCCTTTA G TACGATGTGG CCACT     TGGTCCGTGGGA       T                                           
GTAGTCAAA       A A          A     TATAT            ------- TAATTATTCTAAGGGTGATGCCCAAGTCAATACCGGGTTACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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