SE3550651

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6869
  • Mimulus guttatus
  • SE3550651
  • PIF/harbinger
  • To1
  • scaffold_9:8297092-8297215
  • TTA
  • AGGTGGTGTTTGCAAACGTTTTTCCAAAGTGATTATGAGTTTTTTAATGTTTAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT   T            C                        T   AA  T      AAAA
  AGG GGTGTTTGCAAA GTTTTTCCAAAGTGATTATGAGTT TTT  TG TTAAAA    
  ||| |||||||||||| |||||||||||||||||||||||| |||  || ||||||     
  TCT CCACAAACGTTT CGAAAAGGTTTCACTAATACTCGA AAA  AC AGTTTT    
AT   C            A                        C   AA  C      AGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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