SE3520673

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6891
  • Mimulus guttatus
  • SE3520673
  • Mutator
  • M14
  • scaffold_10:1755210-1755449
  • AATTTTGAA
  • GGGTAAATTACAATCACCCCTGAGGTAAGGTCTATTAACAAAACAACCCCTTATTTTTCATAAATACACCCACCCCTTGTAATTTGTAGATTTCACACTAACACCCTTTTAAAGGGGGTGGATGTAAGAAATTTATAAACTATGGGGTTGAGCGTAATTTATAAAACATAGGGTTTTTTTCGTAATTACACTTTAACTAAGGGAGGTGGTTGTAATTTACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AATTTTGAA                  -   GA   -     C  TTA  -    C     CT   T   C      -  A - C     TT   A            AC  TAA        T
         GGGTAAATTACAATCACC CCT  GGT AAGGT TA   AC AAAA AACCC  TAT TTT ATAAAT AC C C ACCCC  GTA TTTGTAGATTTC  AC   CACCCTTT 
         |||||||||||||||||| |||  ||| ||||| ||   || |||| |||||  ||| ||| |||||| || | | |||||  ||| ||||||||||||  ||   |||||||| A
         CCCATTTAATGTTGGTGG GGG  TCA TTTCA AT   TG TTTT TTGGG  ATA AAA TATTTA TG G G TGGGG  TAT AAATATTTAAAG  TG   GTGGGGGA 
AAGTTTAAA                  A   AA   A     C  TAA  C    T     --   C   A      A  C A T     --   C            AA  TAG        A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3