SE3530683

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6901
  • Mimulus guttatus
  • SE3530683
  • hAT
  • Hat27
  • scaffold_11:10602732-10602954
  • CAGTATGG
  • GTATGGCAGAGCCGGCCCTAGGGTTTCCAGGGCCCTAGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
CA    G          C   -    -TTT      --C  TAG  G        AATC    CCCTGATCTTATAAATTTTTGTTTGCAATATTCTTTTCTATTAAAAAAATAAT
  GTAT GCAGAGCCGG CCT AGGG    CCAGGG   CC   GC AGATAAAA    GAGG                                                     
  |||| |||||||||| ||| ||||    ||||||   ||   || ||||||||    ||||                                                      
  TATG CGTCTCGGCC GGA TCCC    GGTCTC   GG   CG AATCCCGG    GGTA                                                     
GG    A          A   C    CTTC      TAC  TAG  -        ----    AAATTACACCCGGGGTTTTAATTTATTTTCTTTCGGATTATATATATATCTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3