SE3510699

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6917
  • Mimulus guttatus
  • SE3510699
  • Tc1/Mariner
  • St1
  • scaffold_14:23557503-23557766
  • TA
  • TACTCCCTCCTTCCCATATTATTTGTCGTTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
                 A         G     ---------AGCTG       CG   TAAGAAAACCAATAAATGTGCATGGATTATTGAAAAATCATAATAAAAGGACTAAAAAACCACTTTCATTAATTGTTT
TACTCCCTCCTTCCCAT TTATTTGTC TTTTG              ATGCACA  TAT                                                                              
||||||||||||||||| ||||||||| |||||              |||||||  |||                                                                              C
ATGAGGGAGGAAGGGTA AATAAACAG AAGAT              AAGTTTT  ATT                                                                              
                 A         A     CTTTAAAAAAAATA       --   AACAGTGAAACTTAAAAGTTACTTCGTAAATAACACAAAAAGAATATAAACGGGAATGATGATAATTATTTTAATCCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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