SE3550707

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6925
  • Mimulus guttatus
  • SE3550707
  • PIF/harbinger
  • To2
  • scaffold_3:15616259-15616499
  • TTA
  • GCCTCGTTTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAG            C    AGATTAGCCATGATTAACTAAATAATGGGACTTTGTTTGATGTTTGGTATCCCCAATAACTTACCGGGTCGACCCGCAAATATTATGTTATCATGCCTTA
    GCCTCGTTTGGT GGGG                                                                                                    
    |||||||||||| ||||                                                                                                     
    CGGAGCAAACCA ACGG                                                                                                    
ATTA            -    TTCTAATCTAATCCGTTCTATTTTAACTTATTAGCTTACTTTGGGTTAACATAGTAACCTGGAACCTTCTAGATTATTTTTTGTACGGATTCTCCGTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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