SE3520742

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6960
  • Mimulus guttatus
  • SE3520742
  • Mutator
  • M16
  • scaffold_11:2294211-2294420
  • GGGGTAAAA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
                     AAAATGGCTCCTTCGACCCTACACCCGGTGATAAACACTGGGTGGGTTTTCTGCTGCCACGTGTCCTTTTTTTTATTTTCTAAAACCCTTAA
                GGGGT                                                                                            
                |||||                                                                                             
                AAGCT                                                                                            
TAAAATGGGGCTAAAC     GGGATGTGGGCCACTATTTGTGGCCCACTCAGAAGACGACGGTGCACAGAGAAAAAACATAAAATATTATATAAGGGGCGATCTCAAATGGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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