SE2650014

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6982
  • Oryza sativa
  • SE2650014
  • PIF/harbinger
  • To1
  • Chr10:6096616-6096899
  • GGG
  • GGGCCTATTTGGATTGTTACC

Secondary structure and sequence

TSD    TIR
5'



3' 
                     -C     ---- TTT     TAGTGCCAAAATGTAGGCAAGTTTTGGCACTACCAAATCTTTGGTAAAGTAAGATTGCATTGATCATATTTGGTTTGCTACCAATATATAGCTAAAATGTAAAAT
GGGCCTATTTGGATTGTTACC  TACCA    A   TTTGG                                                                                                         
|||||||||||||||||||||  |||||    |   |||||                                                                                                          
CCCGGATAAACCTAACAATGG  TTTGT    G   ATGGT                                                                                                         
                     TT     ACGG ---     TATAAAACCATTAAACTTATCATCAACACAAATTAAACCTAGCTTCGGATAAGTAACCATTATGGATTAAATCTAAACCATAGTAGATCTTATAAGAAGTGATGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3