SE2650022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6990
  • Oryza sativa
  • SE2650022
  • PIF/harbinger
  • To13
  • Chr02:22214248-22214386
  • GGC
  • GGCTGTGTTTAGATCAAAGTTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
            A   -----          --CCAAACTTCAGTCCTTTTCCATC   TCAACCTGTCATAC
GGCTGTGTTTAG TCA     AAGTTTGGAT                         ACA              
|||||||||||| |||     ||||||||||                         |||               
CCGACACAAATC AGT     TTCAAACCTA                         TGA              
            A   CGCAT          AAACCAACTTTAATCTCTACTACAC   CTTTTCAACACACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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