SE2650046

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7014
  • Oryza sativa
  • SE2650046
  • PIF/harbinger
  • To2
  • Chr03:26198361-26198604
  • GGC
  • GGCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
     --    - TATTCATTAACTCTAAACTTTAACTTTCTTATTTTCTTTGAGCACGTTTTTTAAACGATTAAATGGTGGGTTTTTTTTTTCTAAAACAGTTTCTATATAGAAGTTGTTTT
GGCCC  TGCT C                                                                                                              
|||||  |||| |                                                                                                              A
CCGGG  AAGC A                                                                                                              
     TC    T GAGGTCTAAACCTCTGTTTTAAAATAACGTGTATTTGCTCTTTGGAGTAATCGTGTAATAATTAATTCATAATTGATAATATTTAAACTTTTTATCTAAATAAACGAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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