SE2650054

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7022
  • Oryza sativa
  • SE2650054
  • PIF/harbinger
  • To26
  • Chr09:1736668-1736886
  • GGG
  • GGGCCTGTTTGGTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
  G                -- C       AAATATAACTCCAGGAGTTGAGTTTGGAGTGGAGTTGTGGAGCTGCCTAAACCCAGCTCCACAACTCTAGTACATTTTGTG
GG CCTGTTTGGTATAACT  C AACTCCT                                                                                 
|| ||||||||||||||||  | |||||||                                                                                  
CC GGACAAACCGTGTCGA  T CGAGGTC                                                                                 
  G                GG -       GAGGTGGGGAGGACCTCGACCTCGAGTCGGTTTGTCAAAGTCGAGGTGATTTTGACCCTCACCTCAACCCACCTCGAGAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3