SE2650055

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7023
  • Oryza sativa
  • SE2650055
  • PIF/harbinger
  • To27
  • Chr04:31284812-31284943
  • GGG
  • GGGGTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
G  -         GAACT          ------------                   T   A        T
 GG GGTGTTTGG     AGGGACTAAA            TTTAGTCCCTCTCACAAAA TAT AGTCCCTA 
 || |||||||||     ||||||||||            ||||||||||||||||||| ||| |||||||| G
 CC CCACAAACC     TCCCTGATTT            AAATCAGGGAGAGTGTTTT GTA TCAGGGAT 
   A         -AACC          CACCTCGATTTG                   T   A        G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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