SE2650057

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7025
  • Oryza sativa
  • SE2650057
  • PIF/harbinger
  • To28
  • Chr06:13790932-13791234
  • GGC
  • GGCTTATTCG

Secondary structure and sequence

TSD    TIR
5'



3' 
           TTTCAA       G        AAGTACAGGAATATCCAATCCTTTGGAATGAGCATTATACTATCATTCATTTCAAAGGAATGCATGAAAAGAAAAATTCATATCCCTTCACTTTTAGGGGGAAAACAATGGAAAAAAAT
 GGCTTATTCG      AGGATTT TAAAGGAG                                                                                                                       
 ||||||||||      ||||||| ||||||||                                                                                                                        
 CCGAATAAGC      TCTTAAA GTTTGGCA                                                                                                                       
C          CAAACA       A        TCCTTGTCCCTTTTGTATCCTTGTTATATCCTTACGTACACGAACCTTTTGTATCTTTAAAAGGATACCAACCCAACGTTTGTTAGGTTTACTAACTTTTGTAACCCAACCTCACCTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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