SE2650070

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7038
  • Oryza sativa
  • SE2650070
  • PIF/harbinger
  • To36
  • Chr07:10848668-10848803
  • GGG
  • GGGCGTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
    G       A   - AC    A      CGCTCTCACTCAGGCAGGTGCATCCAACCACAGGCCACC
GGGC TGTTTGG TGG T  CCTG CCTGAG                                       
|||| ||||||| ||| |  |||| ||||||                                        
CCCG ACAAACC AGT T  GGGA CTCTTA                                       
    G       A   G --    -      GTGCGAACTCAGTCCGTACTAAGAGTCCGCAGGCTAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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