SE2650079

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7047
  • Oryza sativa
  • SE2650079
  • PIF/harbinger
  • To42
  • Chr02:592622-592858
  • GGG
  • GGGTGCGCTTGTTTCAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
          G       --AG    GGTGGGCTGATTAGCCGCACGTAAAACGAGAAATAAGATTAGCATATAATTAATTAAGTATTAATATATTTTTTTATGAATAAATTTGTTGGA
GGGTGCGCTT TTTCAGC    GTGC                                                                                             
|||||||||| |||||||    ||||                                                                                             T
CCCACGCGAG AAAGTCG    TCCT                                                                                             
          A       AATA    AATCTAAGAGGAGTAAAAGGTAATCGTGCAAAAAGTTTGACGATTTGCTATATAAAGCACGCTTTTGAAAGATATCTCTTCAACAAATTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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