SE2650081

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7049
  • Oryza sativa
  • SE2650081
  • PIF/harbinger
  • To44
  • Chr02:12712648-12712984
  • GGT
  • GGTCTTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
            TTCTAT       ACATTAGCCCCTATCTTTTAGCTCTGAATTAGCCCTCAAGGATCCAAACAGGTGGGCTAATTTTTGGCTAAAGTGAATTAGCCCCCCTCAAAACATTAGCCCCTCCAAGGGGTGCTAATGGGGCTAATTTTGTGTGGGGGCCATG
GGTCTTGTTTGG      GGGCTAA                                                                                                                                                 
||||||||||||      |||||||                                                                                                                                                  
CCGGGACAAACC      TAATCGG                                                                                                                                                 
            ---TTC       GTCCCGATTAAAACTCTCGATTACAAATCAGTACTTAACGATCCGATTTGTAATCGGATCCCACCATACAAACCTAGGTACACGATTAAGTTCCGATTTTCCACCTCTCTCTCATCTTTCTCTCCTCTGTCTTCCTCTCTCTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3