SE2650084

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7052
  • Oryza sativa
  • SE2650084
  • PIF/harbinger
  • To47
  • Chr03:7465066-7465224
  • GGG
  • GGTGTGTTTCGGAAATGGGTTAGGAGATGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
G    -     C           AG         ---    G  AA  GCAAATGAATGGAGGAATAAGATGAAGTGAGGTTAG
 GGTG TGTTT GGAAATGGGTT  GAGATGTGA   GATT GG  AT                                    
 |||| ||||| |||||||||||  |||||||||   |||| ||  ||                                     
 CCGT ACAAA CTTTTACCCAA  CTCTATACT   GAGT GG  AG                                    
     T     C           -A         AAA    -  --  GGTTTCTCATTCAAAATTAGAATCGGTATGTAAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3