SE2650085

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7053
  • Oryza sativa
  • SE2650085
  • PIF/harbinger
  • To48
  • Chr03:9439763-9439908
  • GGC
  • GGCCCTGTTTAGATTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
   CC       A     ACTTTTTCTTCAAACTTCTAAATTTTC  TCACATCGAACTTTTCTACACACACAAACTTCCAACTTT
GGC  TGTTTAG TTCTA                           CG                                       
|||  ||||||| |||||                           ||                                        
CCG  ACAAATC AAGGT                           GG                                       
   AC       -     -------------------------GC  TTTAAACTTTCAAACTTTTTTAACCTTGCTACACTATCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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