SE2650108

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7076
  • Oryza sativa
  • SE2650108
  • PIF/harbinger
  • To66
  • Chr07:24478046-24478181
  • GGG
  • GGGCTTGTTTGCTTGCTGCCCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
      T     C           AGAT     -  TGGCTCAGGCGTCGATGTCAGGCGTTCGATTTCGG
 GGGCT GTTTG TTGCTGCCCTC    TCGCG CC                                   
 ||||| ||||| |||||||||||    ||||| ||                                   T
 CCCGA CAAAC AACGACGGGAG    CGGAC TC                                   
C     -     C           ----     C  TGGCAACGAGTCCGTCCAGCTAGGCTGGCGTCCGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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