SE2650116

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7084
  • Oryza sativa
  • SE2650116
  • PIF/harbinger
  • To70
  • Chr01:24365275-24365482
  • GGG
  • GGGCTAGTTTGGTTTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
                  -----TCCAAATTG    CTACCAATTCATTGGCAATTTTCAATAGTGTTTCTATTTGTTTGGTTTGGTGTCAAATTTTTAACAACAC
GGGCTAGTTTGGTTTGGT              TGCC                                                                      
||||||||||||||||||              ||||                                                                      A
CCCGGTCAAACCAAACCA              AACC                                                                      
                  CGATATGATTTTAG    ATCATGGTTTCAAATCCGTTGAAAATCGTGATGGTTTAAACCTACCGGTTTTGAAAATGATAGATTTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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