SE2650117

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7085
  • Oryza sativa
  • SE2650117
  • PIF/harbinger
  • To71
  • Chr11:10067016-10067200
  • GGG
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
               ATTTGAAGCCAAAATGTGCCCTACCAAATTGTTTGGCACTTTAAATAGTATTTTGATAGTGTTTGGTTTGCTACCAATA
    GGGCCATTTTG                                                                               
    |||||||||||                                                                               G
    CACGAACCAAA                                                                               
CCCA           TGATGGTACGATTTTATAACCATGATAGTTTTGGATCCGTTCAAAATTATCACGGTTTTAAAACCATTGAAAAAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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