SE2650126

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7094
  • Oryza sativa
  • SE2650126
  • PIF/harbinger
  • To8
  • Chr02:19984862-19985082
  • GGC
  • GGCTCCCATCG

Secondary structure and sequence

TSD    TIR
5'



3' 
    T       GTT       TACCCAAAATGGCTTATTTGGCTTATTAGAAAATTAAAATTAATTTATAAGTAAAACTTTTGTAGATTTGTTCGTAGCGACTTAAAAGCTA
 GGC CCCATCG   GCCATTT                                                                                           
 ||| |||||||   |||||||                                                                                            
 TCG GGGTAGC   AAACCGG                                                                                           
G   -       ---       ATTTGTCGGTTTCTTATTCGGTTTTAAACTTAAAAATTTGAACTAAAACTTCAACTAAAATTTTACGAAAATTGCATTAAAAACAATTACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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