SE2650128

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7096
  • Oryza sativa
  • SE2650128
  • PIF/harbinger
  • To79
  • Chr01:34283740-34283898
  • GGC
  • GGCTTTGTTTGGCAAATAGGATAGGGAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
  CTT           --------------------     T        ----------------AATATCAC     CCAAAGGGTAATATTGTA
GG   TGTTTGGCAAA                    TAGGA AGGGAAAT                        ACCCT                  
||   |||||||||||                    ||||| ||||||||                        |||||                  T
CC   ACAAACCGTTT                    ATCCT TTCCTTTA                        ACATA                  
  TAC           ACCCAATACCCTACACCCTA     T        CCTACTTACCAATCCTAATTTACT     CTTCTTACCTACTGATCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3