SE2630143

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7111
  • Oryza sativa
  • SE2630143
  • hAT
  • Hat13
  • Chr10:14717088-14717263
  • CAGTGGCG
  • CAGTGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
       GAAGC    AATTTAACCCTGTGTGGTCAATTACTACTAGTTTGTATTTAAGTGGAGTCTTTTCTCTAATTTTTCTGGATTTA
CAGTGGC     CAGG                                                                          
|||||||     ||||                                                                          T
GTCACCG     CCCG                                                                          
       -----    TATACGTATTCGATACCCCAACCGACTGGGGTATCTAAAAACTTTTTGTGGGGATATCTGGAACTAAAAGTACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3