SE2630151

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7119
  • Oryza sativa
  • SE2630151
  • hAT
  • Hat19
  • Chr09:15785953-15786109
  • TAGGGGTG
  • TAGGGGTGGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
            A   CCTAACATTTTAGCCTACAAAATTTGAGGGCTAGGCCTAAAATGGGTAGGTTGAATTTCTAT
TAGGGGTGGTAA GGG                                                              
|||||||||||| |||                                                              T
ATCCCCACCATT CCT                                                              
            A   AGTTAGGGGTGCTCAAGAAAGTGTTGGGATGGATCTGGAGTATATGAAAATCAAGCTTTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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