SE2630166

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7134
  • Oryza sativa
  • SE2630166
  • hAT
  • Hat31
  • Chr07:21177834-21177991
  • CAGGGGCG
  • CAGGGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
          -     GTGTGGGGCAGCTTGGGCTTGGGCCCCACACCTGGCAAAAAAAATACCAAGGAATTTACTAAT
CAGGGGCGGA GCCAG                                                               
|||||||||| |||||                                                               T
GTCTCCGCCT AATCC                                                               
          C     TAATACACTTCTCATCCCGGATTAGTAATCTCATACTTGAAGAACTTGCTTAAAATTATCCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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