SE2630181

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7149
  • Oryza sativa
  • SE2630181
  • hAT
  • Hat46
  • Chr06:27217722-27217866
  • CAGTGGCG
  • CAGTGGCGTAGCTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
               ------------C  GGTGGCACTATGATCTATGGACCACCTAAAAATTTGATCGAGATTAAA
CAGTGGCGTAGCTAG             TA                                                
|||||||||||||||             ||                                                A
GTCACCGCATCGATT             CC                                                
               TTAAATCTCATTT  ACCAGGTAATATGTTAAAAATAATATAATAGATCGTATATATGATATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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