SE2630183

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7151
  • Oryza sativa
  • SE2630183
  • hAT
  • Hat48
  • Chr09:16017899-16018072
  • CAGGGGCG
  • CAGGGGCGGATCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
   G            AAAGATTACCAGGAGGGTCTGAACAAACCATATAAAATTATAGGCCCCTCTTCTAATAGATGTATGACAGA
CAG GGCGGATCCAGG                                                                       
||| ||||||||||||                                                                        
GTC CCGCCTAGGTGG                                                                       
   A            TACCCCAGAGACCCCAGAGCTCTGGGGCGATGGGCATAACATTACTGGGGTATTTCTGGGGTGATTTTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3