SE2630203

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7171
  • Oryza sativa
  • SE2630203
  • hAT
  • Hat58
  • Chr01:22342402-22342511
  • TAGGGGTG
  • TAGGGGTGTAAGCGG

Secondary structure and sequence

TSD    TIR
5'



3' 
            C  CTAAC  A    A            -     A   CCC   AA
TAGGGGTGTAAG GG     CC CGAA CCCATTTATAGG CTAAA TAA   GCG  
|||||||||||| ||     || |||| |||||||||||| ||||| |||   |||   
ATCCCCACATTC CC     GG GCTT GGGTGAATATCC GGTTT ATT   TGC  
            A  CAGTC  C    -            A     -   ---   CC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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