SE2630221

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7189
  • Oryza sativa
  • SE2630221
  • hAT
  • Hat66
  • Chr05:1517773-1517932
  • CAGTGGCG
  • CAGTGGCGG

Secondary structure and sequence

TSD    TIR
5'



3' 
   T  C      AGAAATTATATAAGACTAGGGCTAAGGTAAGGCTTGACTAATGGAGTATTAGTTTTCTGAACAATTT
CAG GG GGAGCC                                                                   
||| || ||||||                                                                    
GTC CC CCTCCG                                                                   
   C  A      TCCGGATCCCGTCGATCCCGAACTCGGGATCCGGACGGAAGTTTTTGAACGAATTTAAAATAACTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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