SE2630234

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7202
  • Oryza sativa
  • SE2630234
  • hAT
  • Hat73
  • Chr10:18419111-18419373
  • CAGTGGCG
  • CAGTGGCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
   T      C   G   TAAAATATAGATGGTGCAGAGAGCGGAGATGTTCACTCAATAAGAGCAATCAAACATAATACATATCGTATTGGTAGTTCATTCACATAACTGCCTCAATTTTTTAGGTGTTCA
CAG GGCGGA GCA CTT                                                                                                                  
||| |||||| ||| |||                                                                                                                   
GTC CCGCCT GAT GGG                                                                                                                  
   C      A   -   TAATCCGTCCCACCCAGCTGGCTGAGTCGATGTTGAGCACAGTGGGGTGTGAGAGTTCTGGGGGAATGGGGGAATATCATCATTACCCGGTAATTTTAATCCATATTGTTTCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3