SE2620252

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7220
  • Oryza sativa
  • SE2620252
  • Mutator
  • M22
  • Chr03:11691770-11692017
  • GGATTGGGA
  • GGATTGGGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
     GGG   --       GTAGGAATAGCGACTGCAAGTTAAACTAATGCATGCGATTACAACCGTTCATTTTGGTGATGAATGGACCAGATCTTCAGCTACAGTACTGACGCAAAAAATACT
GGATT   ATC  ACTTGCA                                                                                                         
|||||   |||  |||||||                                                                                                          
CCTAA   TAG  CACGTCA                                                                                                         
     ACA   TC       ACCATGATAGTGATATTGAATGCGTCAGGTGACGGTGTACAATCTAGGCTTAGATTGCCAAGTGTACGTGGGCCTATGACATCTTGTGACATCGTTCTTTACAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3