SE2620264

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7232
  • Oryza sativa
  • SE2620264
  • Mutator
  • M32
  • Chr08:17450111-17450269
  • GAGCAATTT
  • GAGCAATTTTATCATCCAACATTTGACATCTCGAGATACAACAAATTTTTGGTACCTCGAGATACT

Secondary structure and sequence

TSD    TIR
5'



3' 
                          C            -----------A     T   T           A    TTCTAGTG
GAGCAATTTTATCATCCAACATTTGA ATCTCGAGATAC            ACAAA TTT GGTACCTCGAG TACT        
|||||||||||||||||||||||||| ||||||||||||            ||||| ||| ||||||||||| ||||         
CTCGTTAAAATAGTAGGTTGTAAACT TGGAGCTCTATG            TGTTT AAA CCATGGAGCTC ATGA        
                          A            GTGTAAAGTGTG     T   C           C    TTTAAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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