SE2620269

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7237
  • Oryza sativa
  • SE2620269
  • Mutator
  • M38
  • Chr12:24919474-24919598
  • CGGAAAGGG
  • GGAAAGGGATCCTCTGATTTAACTGATTTGCAGTTGAGTTACTGACATGTGGGCCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
C    AG                   -  T                         --    AGA
 GGAA  GGATCCTCTGATTTAACTG AT TGCAGTTGAGTTACTGACATGTGGG  CCAT   
 ||||  ||||||||||||||||||| || |||||||||||||||||||||||||  ||||    
 CCTT  TCTAGGAGACTGAATTGAC TG ACGTCAACTCAGTGACTGTACACCC  GGTG   
C    CG                   G  T                         AG    AAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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