SE2620280

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7248
  • Oryza sativa
  • SE2620280
  • Mutator
  • M47
  • Chr03:14302680-14302836
  • AGGATAATT
  • GGATAATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
A  A       GACAA   A    C      -   T     AC   T  C  A     A  AGAATA       A  ACC
 GG TAATTTG     TAC ATCA AAAGAT ATA GAGTT  AAA TA CA CGTAT TG      GTATGTG GG   
 || |||||||     ||| |||| |||||| ||| |||||  ||| || || ||||| ||      ||||||| ||    
 CC GTTAAAC     ATG TAGT TTTTTA TAT CTCAA  TTT AT GT GCATA AC      TATGTAC CC   
C  A       AAACC   G    A      A   -     CT   T  A  A     C  AATAAC       -  AAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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