SE2620295

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7263
  • Oryza sativa
  • SE2620295
  • Mutator
  • M59
  • Chr08:19833803-19833927
  • GGGTGAGGA
  • GGGTGAGGATCCTCTACCATAATGTCACTACCATTA

Secondary structure and sequence

TSD    TIR
5'



3' 
    GA G        C       T           CAGCC             TTCCACTC
GGGT  G ATCCTCTA CATAATG CACTACCATTA     ACTGGTATGTGGG        
||||  | |||||||| ||||||| |||||||||||     |||||||||||||        T
CCCA  T TAGGAGAT GTATTAC GTGATGGTAAT     TGATTGTACACCC        
    AG G        A       C           ATTTA             TGTTATAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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