SE2620308

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7276
  • Oryza sativa
  • SE2620308
  • Mutator
  • M11
  • Chr09:1336859-1336999
  • GGGGCAATT
  • GGGGCAATTGCAAATTTACCACTACTTTGAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
      A          A     ---AC       CATTATT   AAACTGCCACTAGAAAATTGCAAAAATGCC
GGGGCA TTGCAAATTT CCACT     TTTGAAT       GCA                              
|||||| |||||||||| |||||     |||||||       |||                              A
CCCCGT AACGTTTAAA GGTGG     AAACTTA       TAA                              
      A          C     CCAAA       -------   CGTTCCTATGGTGAGCTTACTGTCAAGATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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