SE2620323

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7291
  • Oryza sativa
  • SE2620323
  • Mutator
  • M85
  • Chr08:18850571-18850743
  • GAGATTTGC
  • GAGATTTGCTCCGGTTCAATAAAAAGTAACTCGA

Secondary structure and sequence

TSD    TIR
5'



3' 
           C    C           A     GTTACC       TACG              T                 T G  AGG
GAGATTTGCTC GGTT AATAAAAAGTA CTCGA      GGTATTT    GTACTAAATCGTTT CGATCGTTGGATCTAGC G GC   
||||||||||| |||| ||||||||||| |||||      |||||||    |||||||||||||| ||||||||||||||||| | ||   A
CTCTAAACGAG CCAG TTGTTTTTCAT GAGCT      CCATGAG    TATGATTTAGCAAA GCTAGCAACCTAGATTG T CG   
           A    T           A     ------       ----              C                 T G  GGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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